Cluster: ShaoY_2019_ERR3405274_bin.1_CGC39
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3049 | ShaoY_2019_ERR3405274_bin.1_k141_3049_7 | 5240 | 6325 | + | 3.A.1.2.10 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_3049 | ShaoY_2019_ERR3405274_bin.1_k141_3049_8 | 6695 | 8095 | + | 3.A.6.1.1 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3049 | ShaoY_2019_ERR3405274_bin.1_k141_3049_9 | 8228 | 9331 | - | GT28 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_3049 | ShaoY_2019_ERR3405274_bin.1_k141_3049_10 | 9683 | 10504 | - | GT8 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3049_7
Type: TC
Location: 5240 - 6325 (+)
Type: TC
Location: 5240 - 6325 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3049_8
Type: TC
Location: 6695 - 8095 (+)
Type: TC
Location: 6695 - 8095 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3049_9
Type: CAZyme
Location: 8228 - 9331 (-)
Type: CAZyme
Location: 8228 - 9331 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_3049_10
Type: CAZyme
Location: 9683 - 10504 (-)
Type: CAZyme
Location: 9683 - 10504 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.