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Cluster: ShaoY_2019_ERR3405274_bin.1_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_106 114800 115807 + 3.A.1.23.1
pfam ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_107 115808 116602 + CbiQ
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_108 116717 117439 + 3.A.1.23.1
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_109 117559 118083 + CBM51
NULL(UNKNOWN) ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_110 118515 118925 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_111 119227 119901 + NULL(UNKNOWN)
[View Structural Homologs]
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_112 120372 121649 + 2.A.35.1.5
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_106
Type: TC
Location: 114800 - 115807 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_107
Type: pfam
Location: 115808 - 116602 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_108
Type: TC
Location: 116717 - 117439 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_109
Type: CAZyme
Location: 117559 - 118083 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_110
Type:
Location: 118515 - 118925 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_111
Type:
Location: 119227 - 119901 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_112
Type: TC
Location: 120372 - 121649 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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