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Cluster: ShaoY_2019_ERR3405274_bin.1_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_54 59295 60734 + GH1
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_55 60789 61091 + 4.A.3.2.6
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_56 61110 62459 + 4.A.3.2.9
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_57 62560 62874 + 4.A.3.2.3
TF ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_58 63067 64116 + LacI
STP ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_59 64732 68262 + Fer4
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_60 68708 69028 + 4.A.3.2.7
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_61 69056 70396 + 4.A.3.2.2
peptidase ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_62 70417 71802 + M20.UPA
pfam ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_63 72344 73729 + Lyase_1 | FumaraseC_C
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_64 73883 75493 - 3.A.23.1.1
peptidase ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_65 75748 76710 + T02.UPW
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_66 76727 77335 + 9.B.158.1.1
pfam ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_67 77356 78534 + malic | Malic_M
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_68 78578 78889 + 4.A.3.1.2
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_69 79393 80835 + 9.B.142.3.7
sulfatase ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_70 80822 82615 + S1_8
TC ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_71 82645 84111 + 9.B.142.3.7
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_2974 ShaoY_2019_ERR3405274_bin.1_k141_2974_72 84166 85170 + GT2
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_54
Type: CAZyme
Location: 59295 - 60734 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_55
Type: TC
Location: 60789 - 61091 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_56
Type: TC
Location: 61110 - 62459 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_57
Type: TC
Location: 62560 - 62874 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_58
Type: TF
Location: 63067 - 64116 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_59
Type: STP
Location: 64732 - 68262 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_60
Type: TC
Location: 68708 - 69028 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_61
Type: TC
Location: 69056 - 70396 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_62
Type: peptidase
Location: 70417 - 71802 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_63
Type: pfam
Location: 72344 - 73729 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_64
Type: TC
Location: 73883 - 75493 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_65
Type: peptidase
Location: 75748 - 76710 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_66
Type: TC
Location: 76727 - 77335 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_67
Type: pfam
Location: 77356 - 78534 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_68
Type: TC
Location: 78578 - 78889 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_69
Type: TC
Location: 79393 - 80835 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_70
Type: sulfatase
Location: 80822 - 82615 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_71
Type: TC
Location: 82645 - 84111 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2974_72
Type: CAZyme
Location: 84166 - 85170 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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