dbCAN Logo

Cluster: ShaoY_2019_ERR3405274_bin.1_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_14 14422 14985 + 3.A.1.26.7
pfam ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_15 14936 15769 + HK
pfam ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_16 15770 16399 + TMP-TENI
TC ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_17 16967 18310 + 2.A.23.1.5
CAZyme ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_18 18553 19917 + AA7
STP ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_19 20443 21015 + Nitroreductase
TC ShaoY_2019_ERR3405274_bin.1_k141_2382 ShaoY_2019_ERR3405274_bin.1_k141_2382_20 21319 23238 + 2.A.67.4.2
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_14
Type: TC
Location: 14422 - 14985 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_15
Type: pfam
Location: 14936 - 15769 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_16
Type: pfam
Location: 15770 - 16399 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_17
Type: TC
Location: 16967 - 18310 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_18
Type: CAZyme
Location: 18553 - 19917 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_19
Type: STP
Location: 20443 - 21015 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2382_20
Type: TC
Location: 21319 - 23238 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List