Cluster: ShaoY_2019_ERR3405274_bin.1_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_220 | ShaoY_2019_ERR3405274_bin.1_k141_220_16 | 17507 | 19765 | - | GT35 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_220 | ShaoY_2019_ERR3405274_bin.1_k141_220_17 | 19960 | 20583 | - | Hydrolase | Hydrolase_like | HAD_2 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_220 | ShaoY_2019_ERR3405274_bin.1_k141_220_18 | 20785 | 23475 | - | 3.A.3.4.1 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_220_16
Type: CAZyme
Location: 17507 - 19765 (-)
Type: CAZyme
Location: 17507 - 19765 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_220_17
Type: pfam
Location: 19960 - 20583 (-)
Type: pfam
Location: 19960 - 20583 (-)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_220_18
Type: TC
Location: 20785 - 23475 (-)
Type: TC
Location: 20785 - 23475 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.