Cluster: ShaoY_2019_ERR3405274_bin.1_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_2041 | ShaoY_2019_ERR3405274_bin.1_k141_2041_28 | 28225 | 32190 | + | CBM32 | CBM40 | GH33 |
| peptidase | ShaoY_2019_ERR3405274_bin.1_k141_2041 | ShaoY_2019_ERR3405274_bin.1_k141_2041_29 | 32370 | 34220 | + | U69.UPW |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_2041 | ShaoY_2019_ERR3405274_bin.1_k141_2041_30 | 34407 | 36005 | + | GH13_31 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_2041 | ShaoY_2019_ERR3405274_bin.1_k141_2041_31 | 36204 | 37628 | + | 4.A.1.2.13 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_2041 | ShaoY_2019_ERR3405274_bin.1_k141_2041_32 | 37672 | 39342 | + | GH13_29 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2041_28
Type: CAZyme
Location: 28225 - 32190 (+)
Type: CAZyme
Location: 28225 - 32190 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2041_29
Type: peptidase
Location: 32370 - 34220 (+)
Type: peptidase
Location: 32370 - 34220 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2041_30
Type: CAZyme
Location: 34407 - 36005 (+)
Type: CAZyme
Location: 34407 - 36005 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2041_31
Type: TC
Location: 36204 - 37628 (+)
Type: TC
Location: 36204 - 37628 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_2041_32
Type: CAZyme
Location: 37672 - 39342 (+)
Type: CAZyme
Location: 37672 - 39342 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.