Cluster: ShaoY_2019_ERR3405274_bin.1_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_871 | ShaoY_2019_ERR3405274_bin.1_k141_871_43 | 53670 | 54671 | + | 3.A.1.14.15 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_871 | ShaoY_2019_ERR3405274_bin.1_k141_871_44 | 54672 | 55676 | + | 3.A.1.14.15 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_871 | ShaoY_2019_ERR3405274_bin.1_k141_871_45 | 55933 | 56730 | + | 3.A.1.14.7 |
| pfam | ShaoY_2019_ERR3405274_bin.1_k141_871 | ShaoY_2019_ERR3405274_bin.1_k141_871_46 | 56756 | 58162 | + | MFS_3 | MFS_1 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_871 | ShaoY_2019_ERR3405274_bin.1_k141_871_47 | 58594 | 65154 | + | GH101 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_871_43
Type: TC
Location: 53670 - 54671 (+)
Type: TC
Location: 53670 - 54671 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_871_44
Type: TC
Location: 54672 - 55676 (+)
Type: TC
Location: 54672 - 55676 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_871_45
Type: TC
Location: 55933 - 56730 (+)
Type: TC
Location: 55933 - 56730 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_871_46
Type: pfam
Location: 56756 - 58162 (+)
Type: pfam
Location: 56756 - 58162 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_871_47
Type: CAZyme
Location: 58594 - 65154 (+)
Type: CAZyme
Location: 58594 - 65154 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.