Cluster: ShaoY_2019_ERR3405274_bin.1_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3405274_bin.1
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3405274_bin.1_k141_592 | ShaoY_2019_ERR3405274_bin.1_k141_592_117 | 117624 | 118538 | + | 3.A.1.1.18 |
| TC | ShaoY_2019_ERR3405274_bin.1_k141_592 | ShaoY_2019_ERR3405274_bin.1_k141_592_118 | 118553 | 119449 | + | 3.A.1.1.18 |
| CAZyme | ShaoY_2019_ERR3405274_bin.1_k141_592 | ShaoY_2019_ERR3405274_bin.1_k141_592_119 | 119464 | 121623 | + | GH112 |
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_117
Type: TC
Location: 117624 - 118538 (+)
Type: TC
Location: 117624 - 118538 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_118
Type: TC
Location: 118553 - 119449 (+)
Type: TC
Location: 118553 - 119449 (+)
Gene ID: ShaoY_2019_ERR3405274_bin.1_k141_592_119
Type: CAZyme
Location: 119464 - 121623 (+)
Type: CAZyme
Location: 119464 - 121623 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp018372555
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.