dbCAN Logo

Cluster: ShaoY_2019_ERR3404980_bin.1_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_5 2838 4067 + 2.A.1.2.25
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_6 4311 5636 + GH4
TC ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_7 5661 7241 + 4.A.1.1.14
TF ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_8 7319 8134 + HTH_6
TC ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_9 8312 9874 - 4.A.1.1.3
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4471 ShaoY_2019_ERR3404980_bin.1_k141_4471_10 9957 11282 - GH4
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_5
Type: TC
Location: 2838 - 4067 (+)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_6
Type: CAZyme
Location: 4311 - 5636 (+)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_7
Type: TC
Location: 5661 - 7241 (+)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_8
Type: TF
Location: 7319 - 8134 (+)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_9
Type: TC
Location: 8312 - 9874 (-)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4471_10
Type: CAZyme
Location: 9957 - 11282 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List