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Cluster: ShaoY_2019_ERR3404980_bin.1_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4323 ShaoY_2019_ERR3404980_bin.1_k141_4323_5 3848 5035 - GT4
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4323 ShaoY_2019_ERR3404980_bin.1_k141_4323_6 5032 6045 - GT32
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4323 ShaoY_2019_ERR3404980_bin.1_k141_4323_7 6038 7321 - GT4
CAZyme ShaoY_2019_ERR3404980_bin.1_k141_4323 ShaoY_2019_ERR3404980_bin.1_k141_4323_8 7318 8442 - GT4
TC ShaoY_2019_ERR3404980_bin.1_k141_4323 ShaoY_2019_ERR3404980_bin.1_k141_4323_9 8443 9198 - 9.B.18.1.2
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4323_5
Type: CAZyme
Location: 3848 - 5035 (-)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4323_6
Type: CAZyme
Location: 5032 - 6045 (-)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4323_7
Type: CAZyme
Location: 6038 - 7321 (-)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4323_8
Type: CAZyme
Location: 7318 - 8442 (-)
Gene ID: ShaoY_2019_ERR3404980_bin.1_k141_4323_9
Type: TC
Location: 8443 - 9198 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
ShaoY_2019_ERR3404980_bin.1_k141_4323_7 vegetarian > vegan 1.80113 0.00364
ShaoY_2019_ERR3404980_bin.1_k141_4323_8 vegetarian > vegan 2.86349 0.00364

🧭 Explore Read Mapping of CGC

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