Cluster: ShaoY_2019_ERR3404906_bin.6_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_2726 | ShaoY_2019_ERR3404906_bin.6_k141_2726_166 | 168005 | 168667 | + | 9.B.27.1.2 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.6_k141_2726 | ShaoY_2019_ERR3404906_bin.6_k141_2726_167 | 168718 | 169374 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_2726 | ShaoY_2019_ERR3404906_bin.6_k141_2726_168 | 169708 | 170415 | + | GT51 |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_2726 | ShaoY_2019_ERR3404906_bin.6_k141_2726_169 | 170471 | 171334 | + | Acetyltransf_1 | Acetyltransf_3 | Acetyltransf_7 | Acetyltransf_10 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_2726 | ShaoY_2019_ERR3404906_bin.6_k141_2726_170 | 171634 | 174156 | + | 3.A.3.30.4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_2726_166
Type: TC
Location: 168005 - 168667 (+)
Type: TC
Location: 168005 - 168667 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_2726_167
Type:
Location: 168718 - 169374 (-)
Type:
Location: 168718 - 169374 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_2726_168
Type: CAZyme
Location: 169708 - 170415 (+)
Type: CAZyme
Location: 169708 - 170415 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_2726_169
Type: pfam
Location: 170471 - 171334 (+)
Type: pfam
Location: 170471 - 171334 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_2726_170
Type: TC
Location: 171634 - 174156 (+)
Type: TC
Location: 171634 - 174156 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.