Cluster: ShaoY_2019_ERR3404906_bin.6_CGC31
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_7270 | ShaoY_2019_ERR3404906_bin.6_k141_7270_79 | 85580 | 86449 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_7270 | ShaoY_2019_ERR3404906_bin.6_k141_7270_80 | 86451 | 87302 | + | 3.A.1.1.20 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_7270 | ShaoY_2019_ERR3404906_bin.6_k141_7270_81 | 87334 | 88431 | + | 3.A.1.1.20 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_7270 | ShaoY_2019_ERR3404906_bin.6_k141_7270_82 | 88457 | 89794 | + | GH32 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_7270_79
Type: TC
Location: 85580 - 86449 (+)
Type: TC
Location: 85580 - 86449 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_7270_80
Type: TC
Location: 86451 - 87302 (+)
Type: TC
Location: 86451 - 87302 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_7270_81
Type: TC
Location: 87334 - 88431 (+)
Type: TC
Location: 87334 - 88431 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_7270_82
Type: CAZyme
Location: 88457 - 89794 (+)
Type: CAZyme
Location: 88457 - 89794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.