Cluster: ShaoY_2019_ERR3404906_bin.6_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1793 | ShaoY_2019_ERR3404906_bin.6_k141_1793_6 | 5337 | 7217 | + | 4.A.2.1.4 |
| STP | ShaoY_2019_ERR3404906_bin.6_k141_1793 | ShaoY_2019_ERR3404906_bin.6_k141_1793_7 | 7262 | 7879 | - | NUDIX |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_1793 | ShaoY_2019_ERR3404906_bin.6_k141_1793_8 | 7909 | 9051 | - | CE9 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1793 | ShaoY_2019_ERR3404906_bin.6_k141_1793_9 | 9185 | 11416 | + | 3.A.7.16.1 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1793_6
Type: TC
Location: 5337 - 7217 (+)
Type: TC
Location: 5337 - 7217 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1793_7
Type: STP
Location: 7262 - 7879 (-)
Type: STP
Location: 7262 - 7879 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1793_8
Type: CAZyme
Location: 7909 - 9051 (-)
Type: CAZyme
Location: 7909 - 9051 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1793_9
Type: TC
Location: 9185 - 11416 (+)
Type: TC
Location: 9185 - 11416 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.