Cluster: ShaoY_2019_ERR3404906_bin.6_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5114 | ShaoY_2019_ERR3404906_bin.6_k141_5114_75 | 60253 | 60729 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5114 | ShaoY_2019_ERR3404906_bin.6_k141_5114_76 | 60771 | 61658 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5114 | ShaoY_2019_ERR3404906_bin.6_k141_5114_77 | 61642 | 62457 | + | 4.A.6.1.18 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_5114 | ShaoY_2019_ERR3404906_bin.6_k141_5114_78 | 62552 | 62956 | + | 4.A.6.1.18 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_5114 | ShaoY_2019_ERR3404906_bin.6_k141_5114_79 | 63039 | 64817 | + | GH35 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5114_75
Type: TC
Location: 60253 - 60729 (+)
Type: TC
Location: 60253 - 60729 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5114_76
Type: TC
Location: 60771 - 61658 (+)
Type: TC
Location: 60771 - 61658 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5114_77
Type: TC
Location: 61642 - 62457 (+)
Type: TC
Location: 61642 - 62457 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5114_78
Type: TC
Location: 62552 - 62956 (+)
Type: TC
Location: 62552 - 62956 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_5114_79
Type: CAZyme
Location: 63039 - 64817 (+)
Type: CAZyme
Location: 63039 - 64817 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.