Cluster: ShaoY_2019_ERR3404906_bin.6_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_1 | 266 | 1540 | + | 2.A.53.3.11 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_2 | 1779 | 3212 | + | GT5 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_3 | 3245 | 5680 | + | GT35 |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_4 | 5926 | 7086 | + | NTP_transferase | Hexapep_GlmU |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_5 | 7451 | 9022 | + | 4.A.1.1.8 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_4574 | ShaoY_2019_ERR3404906_bin.6_k141_4574_6 | 9065 | 10393 | + | GH4 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_1
Type: TC
Location: 266 - 1540 (+)
Type: TC
Location: 266 - 1540 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_2
Type: CAZyme
Location: 1779 - 3212 (+)
Type: CAZyme
Location: 1779 - 3212 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_3
Type: CAZyme
Location: 3245 - 5680 (+)
Type: CAZyme
Location: 3245 - 5680 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_4
Type: pfam
Location: 5926 - 7086 (+)
Type: pfam
Location: 5926 - 7086 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_5
Type: TC
Location: 7451 - 9022 (+)
Type: TC
Location: 7451 - 9022 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4574_6
Type: CAZyme
Location: 9065 - 10393 (+)
Type: CAZyme
Location: 9065 - 10393 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.