Cluster: ShaoY_2019_ERR3404906_bin.6_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_4031 | ShaoY_2019_ERR3404906_bin.6_k141_4031_20 | 20121 | 25898 | + | CBM51 | CBM51 |
| TF | ShaoY_2019_ERR3404906_bin.6_k141_4031 | ShaoY_2019_ERR3404906_bin.6_k141_4031_21 | 26060 | 26533 | + | MarR |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_4031 | ShaoY_2019_ERR3404906_bin.6_k141_4031_22 | 26683 | 27918 | + | 2.A.1.2.41 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4031_20
Type: CAZyme
Location: 20121 - 25898 (+)
Type: CAZyme
Location: 20121 - 25898 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4031_21
Type: TF
Location: 26060 - 26533 (+)
Type: TF
Location: 26060 - 26533 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_4031_22
Type: TC
Location: 26683 - 27918 (+)
Type: TC
Location: 26683 - 27918 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.