Cluster: ShaoY_2019_ERR3404906_bin.6_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_3975 | ShaoY_2019_ERR3404906_bin.6_k141_3975_50 | 42537 | 43592 | + | 3.A.15.2.1 |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_3975 | ShaoY_2019_ERR3404906_bin.6_k141_3975_51 | 43796 | 45079 | + | FtsA |
| pfam | ShaoY_2019_ERR3404906_bin.6_k141_3975 | ShaoY_2019_ERR3404906_bin.6_k141_3975_52 | 45093 | 46247 | + | Tubulin | FtsZ_C |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_3975 | ShaoY_2019_ERR3404906_bin.6_k141_3975_53 | 46450 | 48735 | + | GH73 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3975_50
Type: TC
Location: 42537 - 43592 (+)
Type: TC
Location: 42537 - 43592 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3975_51
Type: pfam
Location: 43796 - 45079 (+)
Type: pfam
Location: 43796 - 45079 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3975_52
Type: pfam
Location: 45093 - 46247 (+)
Type: pfam
Location: 45093 - 46247 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3975_53
Type: CAZyme
Location: 46450 - 48735 (+)
Type: CAZyme
Location: 46450 - 48735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.