Cluster: ShaoY_2019_ERR3404906_bin.6_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_3568 | ShaoY_2019_ERR3404906_bin.6_k141_3568_91 | 99395 | 101386 | + | 4.A.2.1.6 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_3568 | ShaoY_2019_ERR3404906_bin.6_k141_3568_92 | 101450 | 104068 | + | GH38 |
| TF | ShaoY_2019_ERR3404906_bin.6_k141_3568 | ShaoY_2019_ERR3404906_bin.6_k141_3568_93 | 104098 | 104895 | + | HTH_6 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_3568 | ShaoY_2019_ERR3404906_bin.6_k141_3568_94 | 104908 | 106284 | + | GH1 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3568_91
Type: TC
Location: 99395 - 101386 (+)
Type: TC
Location: 99395 - 101386 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3568_92
Type: CAZyme
Location: 101450 - 104068 (+)
Type: CAZyme
Location: 101450 - 104068 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3568_93
Type: TF
Location: 104098 - 104895 (+)
Type: TF
Location: 104098 - 104895 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_3568_94
Type: CAZyme
Location: 104908 - 106284 (+)
Type: CAZyme
Location: 104908 - 106284 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.