Cluster: ShaoY_2019_ERR3404906_bin.6_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.6
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_5 | 2986 | 4302 | - | 4.A.3.2.8 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_6 | 4330 | 5739 | - | GH1 |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_7 | 5953 | 7248 | - | 2.A.23.1.5 |
| CAZyme | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_8 | 7799 | 10648 | + | CBM32 | GH85 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_9 | 10824 | 10994 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | ShaoY_2019_ERR3404906_bin.6_k141_1346 | ShaoY_2019_ERR3404906_bin.6_k141_1346_10 | 11017 | 12474 | - | 9.B.142.3.7 |
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_5
Type: TC
Location: 2986 - 4302 (-)
Type: TC
Location: 2986 - 4302 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_6
Type: CAZyme
Location: 4330 - 5739 (-)
Type: CAZyme
Location: 4330 - 5739 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_7
Type: TC
Location: 5953 - 7248 (-)
Type: TC
Location: 5953 - 7248 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_8
Type: CAZyme
Location: 7799 - 10648 (+)
Type: CAZyme
Location: 7799 - 10648 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_9
Type:
Location: 10824 - 10994 (+)
Type:
Location: 10824 - 10994 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.6_k141_1346_10
Type: TC
Location: 11017 - 12474 (-)
Type: TC
Location: 11017 - 12474 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.