Cluster: ShaoY_2019_ERR3404906_bin.10_CGC51
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: ShaoY_2019_ERR3404906_bin.10
- Continent: Europe
- Source Study: Zeng et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_40 | 37247 | 37801 | - | 2.A.51.1.6 |
| TC | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_41 | 37798 | 38355 | - | 2.A.51.1.5 |
| TF | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_42 | 38478 | 39368 | + | HTH_1 |
| NULL(UNKNOWN) | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_43 | 39435 | 40196 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_44 | 40198 | 41061 | + | GT8 |
| CAZyme | ShaoY_2019_ERR3404906_bin.10_k141_8864 | ShaoY_2019_ERR3404906_bin.10_k141_8864_45 | 41090 | 42052 | + | GT8 |
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_40
Type: TC
Location: 37247 - 37801 (-)
Type: TC
Location: 37247 - 37801 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_41
Type: TC
Location: 37798 - 38355 (-)
Type: TC
Location: 37798 - 38355 (-)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_42
Type: TF
Location: 38478 - 39368 (+)
Type: TF
Location: 38478 - 39368 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_43
Type:
Location: 39435 - 40196 (+)
Type:
Location: 39435 - 40196 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_44
Type: CAZyme
Location: 40198 - 41061 (+)
Type: CAZyme
Location: 40198 - 41061 (+)
Gene ID: ShaoY_2019_ERR3404906_bin.10_k141_8864_45
Type: CAZyme
Location: 41090 - 42052 (+)
Type: CAZyme
Location: 41090 - 42052 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Lacrimispora
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.