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PROTEIN: ShaoY_2019_ERR3404906_bin.10_k141_8864_43

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Protein File & Metadata
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Source:
ShaoY_2019_ERR3404906_bin.10_k141_8864_43.pdb
Genome ID:
ShaoY_2019_ERR3404906_bin.10
Protein ID:
ShaoY_2019_ERR3404906_bin.10_k141_8864_43

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Detailed structural information will appear here after analysis...

Protein Sequence 
MQIRRYRSVT   DDFIESKNQT   FCLPEDYAWL   REGLFDKGIS   GIVYLLGTAF   AYFYCRFYLH 60
MKIKNKRIIR   KYRNTGFFLY   GNHTQPIGDA   FIPIRTVFPK   RGYAVVSPAN   LGIPFLGPLL 120
PALGALPVPA   SFEGMKKLDE   AIRQRIREKR   FVVFYPEAHV   WPWYTGIRPF   PAVSFGYPVN 180
CKAPSFCMTA   TYQKRKYRKK   PFLTVYLDGP   FYPDTSLPRK   EQKNRLCDEI   YRCMLRRSKE 240
SNYQYIRYEE   EES 253
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A3P7FL30-F1-model_v4 33 244 1 213 0.725 0.8166
AF-A0A133CQL3-F1-model_v4 41 250 1 206 0.7236 0.8207
AF-Q2FXJ7-F1-model_v4 43 244 1 203 0.7123 0.8173
AF-A0A044TDE6-F1-model_v4 18 243 2 254 0.7046 0.8098
AF-A0A044SCM5-F1-model_v4 12 244 1 230 0.704 0.7612
AF-Q4KLG6-F1-model_v4 20 243 1 257 0.6981 0.8202
AF-A0A1P6CBR8-F1-model_v4 19 243 3 256 0.698 0.8088
AF-A0A3P7E7Q7-F1-model_v4 20 241 4 254 0.6973 0.814
AF-Q23598-F1-model_v4 12 241 1 268 0.697 0.8274
AF-I7HJS2-F1-model_v4 20 243 1 258 0.6956 0.8189
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
S3K101 GT8 1 251 320 596 0.626 0.8932
AF-A0A7T3RDM0-F1-model_v4 GT8 1 252 322 607 0.6174 0.8821
BDF45928.1 GT4 6 240 397 635 0.5883 0.9099
AF-A0A1B1YLD1-F1-model_v4 GT4 2 242 51 617 0.5823 0.8833
AF-A0A1B1YE69-F1-model_v4 GT4 2 242 52 617 0.5813 0.882
AF-L7VPV9-F1-model_v4 GT4 1 242 52 617 0.581 0.8784
AF-A0A449BEW6-F1-model_v4 GT4 25 240 361 575 0.5632 0.9209
AF-F8F352-F1-model_v4 GT4 23 242 405 631 0.5607 0.9218
AF-U4KNE3-F1-model_v4 GT4 25 240 380 598 0.5571 0.9177
AF-A3DFM2-F1-model_v4 GT4 15 240 8 626 0.5524 0.8824
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
S3K101 GT8 1 251 320 596 0.626 0.8932
A0A7T3RDM0 GT8 1 252 322 607 0.6174 0.8821
BDF45928.1 GT4 6 240 397 635 0.5883 0.9099
A0A1B1YE69 GT4 2 242 52 617 0.5813 0.882
A0A449BEW6 GT4 25 240 361 575 0.5632 0.9209
F8F352 GT4 23 242 405 631 0.5607 0.9218
U4KNE3 GT4 25 240 380 598 0.5571 0.9177
A3DFM2 GT4 15 240 8 626 0.5524 0.8824
QUB47473.1 GT2 1 243 194 483 0.5232 0.7223
A0A448L556 GT2 1 244 224 524 0.51 0.7191
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5f34-assembly1.cif.gz_A 4 253 1 246 0.5757 0.6148
5kn7-assembly1.cif.gz_B-2 2 253 33 290 0.5205 0.6004
5knk-assembly1.cif.gz_B-2 1 253 4 295 0.5169 0.597
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O07584-F1-model_v4 43 243 1 199 0.7112 0.816
AF-Q91WF0-F1-model_v4 20 243 1 257 0.6985 0.8205
AF-Q6IV76-F1-model_v4 20 243 1 257 0.6981 0.8201
AF-Q6IV77-F1-model_v4 20 244 1 256 0.6954 0.8139
AF-Q6IV78-F1-model_v4 20 243 1 257 0.6954 0.8175
AF-F1QCP6-F1-model_v4 20 244 1 256 0.6942 0.8108
AF-Q59188-F1-model_v4 31 243 37 250 0.6902 0.8286
AF-Q49402-F1-model_v4 32 245 42 268 0.676 0.8331
AF-Q9ZJN8-F1-model_v4 1 244 2 236 0.6753 0.7234
AF-O25903-F1-model_v4 1 247 4 239 0.6733 0.7232
Download Full SwissProt Results