Cluster: SW196_bin.29_CGC44
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 3
- Substrate:
- Genome ID: SW196_bin.29
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_67010 | k141_67010_5 | 4814 | 6271 | - | 3.A.1.30.1 |
| CAZyme | k141_67010 | k141_67010_6 | 6322 | 8322 | - | GH13_14 |
| pfam | k141_67010 | k141_67010_7 | 8332 | 8901 | - | RuvC |
| pfam | k141_67010 | k141_67010_8 | 8898 | 9203 | - | DUF4286 |
| TC | k141_67010 | k141_67010_9 | 9261 | 11024 | + | 4.C.1.1.7 |
| TC | k141_67010 | k141_67010_10 | 11323 | 13431 | + | 1.B.14.15.2 |
| STP | k141_67010 | k141_67010_11 | 13445 | 14272 | + | SBP_bac_3 |
| CAZyme | k141_67010 | k141_67010_12 | 14286 | 15275 | + | GH179 |
| pfam | k141_67010 | k141_67010_13 | 15288 | 16358 | + | DUF4421 |
| TC | k141_67010 | k141_67010_14 | 16433 | 18040 | - | 1.B.9.4.2 |
| NULL(UNKNOWN) | k141_67010 | k141_67010_15 | 18070 | 19359 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_67010 | k141_67010_16 | 19635 | 20813 | - | BT_3987-like_N | Laminin_G_3 |
| CAZyme | k141_67010 | k141_67010_17 | 20836 | 21942 | - | GH18 |
| TC | k141_67010 | k141_67010_18 | 21974 | 23593 | - | 8.A.46.2.2 |
| TC | k141_67010 | k141_67010_19 | 23617 | 26700 | - | 1.B.14.6.13 |
Gene ID: k141_67010_5
Type: TC
Location: 4814 - 6271 (-)
Type: TC
Location: 4814 - 6271 (-)
Gene ID: k141_67010_6
Type: CAZyme
Location: 6322 - 8322 (-)
Type: CAZyme
Location: 6322 - 8322 (-)
Gene ID: k141_67010_7
Type: pfam
Location: 8332 - 8901 (-)
Type: pfam
Location: 8332 - 8901 (-)
Gene ID: k141_67010_8
Type: pfam
Location: 8898 - 9203 (-)
Type: pfam
Location: 8898 - 9203 (-)
Gene ID: k141_67010_9
Type: TC
Location: 9261 - 11024 (+)
Type: TC
Location: 9261 - 11024 (+)
Gene ID: k141_67010_10
Type: TC
Location: 11323 - 13431 (+)
Type: TC
Location: 11323 - 13431 (+)
Gene ID: k141_67010_11
Type: STP
Location: 13445 - 14272 (+)
Type: STP
Location: 13445 - 14272 (+)
Gene ID: k141_67010_12
Type: CAZyme
Location: 14286 - 15275 (+)
Type: CAZyme
Location: 14286 - 15275 (+)
Gene ID: k141_67010_13
Type: pfam
Location: 15288 - 16358 (+)
Type: pfam
Location: 15288 - 16358 (+)
Gene ID: k141_67010_14
Type: TC
Location: 16433 - 18040 (-)
Type: TC
Location: 16433 - 18040 (-)
Gene ID: k141_67010_15
Type:
Location: 18070 - 19359 (-)
Type:
Location: 18070 - 19359 (-)
Gene ID: k141_67010_16
Type: pfam
Location: 19635 - 20813 (-)
Type: pfam
Location: 19635 - 20813 (-)
Gene ID: k141_67010_17
Type: CAZyme
Location: 20836 - 21942 (-)
Type: CAZyme
Location: 20836 - 21942 (-)
Gene ID: k141_67010_18
Type: TC
Location: 21974 - 23593 (-)
Type: TC
Location: 21974 - 23593 (-)
Gene ID: k141_67010_19
Type: TC
Location: 23617 - 26700 (-)
Type: TC
Location: 23617 - 26700 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.