Cluster: SW196_bin.29_CGC32
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate:
- Genome ID: SW196_bin.29
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_90253 | k141_90253_23 | 29021 | 29257 | - | 3.D.1.6.4 |
| pfam | k141_90253 | k141_90253_24 | 29569 | 30579 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | k141_90253 | k141_90253_25 | 30712 | 31317 | + | DUF4254 |
| CAZyme | k141_90253 | k141_90253_26 | 31327 | 32361 | + | GT9 |
| pfam | k141_90253 | k141_90253_27 | 32474 | 33400 | + | Lip_A_acyltrans |
| NULL(UNKNOWN) | k141_90253 | k141_90253_28 | 33387 | 34235 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_90253 | k141_90253_29 | 34251 | 35207 | - | GT90 |
| CAZyme | k141_90253 | k141_90253_30 | 35346 | 36155 | + | GT11 |
| CAZyme | k141_90253 | k141_90253_31 | 36171 | 36977 | + | GT2 |
| pfam | k141_90253 | k141_90253_32 | 36970 | 38058 | + | Glyco_tran_WbsX |
| CAZyme | k141_90253 | k141_90253_33 | 38183 | 38938 | - | GT2 |
| CAZyme | k141_90253 | k141_90253_34 | 38948 | 40075 | - | GT4 |
| CAZyme | k141_90253 | k141_90253_35 | 40228 | 41016 | + | CE4 |
| CAZyme | k141_90253 | k141_90253_36 | 41013 | 41969 | + | GT2 |
Gene ID: k141_90253_23
Type: TC
Location: 29021 - 29257 (-)
Type: TC
Location: 29021 - 29257 (-)
Gene ID: k141_90253_24
Type: pfam
Location: 29569 - 30579 (-)
Type: pfam
Location: 29569 - 30579 (-)
Gene ID: k141_90253_25
Type: pfam
Location: 30712 - 31317 (+)
Type: pfam
Location: 30712 - 31317 (+)
Gene ID: k141_90253_26
Type: CAZyme
Location: 31327 - 32361 (+)
Type: CAZyme
Location: 31327 - 32361 (+)
Gene ID: k141_90253_27
Type: pfam
Location: 32474 - 33400 (+)
Type: pfam
Location: 32474 - 33400 (+)
Gene ID: k141_90253_28
Type:
Location: 33387 - 34235 (-)
Type:
Location: 33387 - 34235 (-)
Gene ID: k141_90253_29
Type: CAZyme
Location: 34251 - 35207 (-)
Type: CAZyme
Location: 34251 - 35207 (-)
Gene ID: k141_90253_30
Type: CAZyme
Location: 35346 - 36155 (+)
Type: CAZyme
Location: 35346 - 36155 (+)
Gene ID: k141_90253_31
Type: CAZyme
Location: 36171 - 36977 (+)
Type: CAZyme
Location: 36171 - 36977 (+)
Gene ID: k141_90253_32
Type: pfam
Location: 36970 - 38058 (+)
Type: pfam
Location: 36970 - 38058 (+)
Gene ID: k141_90253_33
Type: CAZyme
Location: 38183 - 38938 (-)
Type: CAZyme
Location: 38183 - 38938 (-)
Gene ID: k141_90253_34
Type: CAZyme
Location: 38948 - 40075 (-)
Type: CAZyme
Location: 38948 - 40075 (-)
Gene ID: k141_90253_35
Type: CAZyme
Location: 40228 - 41016 (+)
Type: CAZyme
Location: 40228 - 41016 (+)
Gene ID: k141_90253_36
Type: CAZyme
Location: 41013 - 41969 (+)
Type: CAZyme
Location: 41013 - 41969 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola faecicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.