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Cluster: SW196_bin.29_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_172607 k141_172607_2 2209 3072 - 2.A.7.3.65
CAZyme k141_172607 k141_172607_3 3307 6459 + GH92
TF k141_172607 k141_172607_4 6518 7408 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) k141_172607 k141_172607_5 7575 7784 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_172607 k141_172607_6 8259 11333 + 1.B.14.6.13
TC k141_172607 k141_172607_7 11345 12877 + 8.A.46.2.1
CAZyme k141_172607 k141_172607_8 12902 14011 + GH18
pfam k141_172607 k141_172607_9 14051 15238 + BT_3987-like_N | Laminin_G_3
pfam k141_172607 k141_172607_10 15455 16789 - SusD_RagB | SusD-like_3
TC k141_172607 k141_172607_11 16807 20079 - 1.B.14.6.1
pfam k141_172607 k141_172607_12 20282 22924 - DUF4953 | DUF5117 | DUF5118
CAZyme k141_172607 k141_172607_13 23146 25200 + GH20
STP k141_172607 k141_172607_14 25638 26216 + Sigma70_r2 | Sigma70_r4_2
pfam k141_172607 k141_172607_15 26450 26842 + RseC_MucC
TC k141_172607 k141_172607_16 26866 27789 + 3.D.6.1.4
TC k141_172607 k141_172607_17 27825 29162 + 3.D.6.1.2
TC k141_172607 k141_172607_18 29171 30160 + 3.D.6.1.2
TC k141_172607 k141_172607_19 30157 30813 + 3.D.6.1.2
TC k141_172607 k141_172607_20 30851 31414 + 3.D.6.1.2
TC k141_172607 k141_172607_21 31437 32039 + 3.D.6.1.2
pfam k141_172607 k141_172607_22 32115 33149 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | KR | GDP_Man_Dehyd
TC k141_172607 k141_172607_23 33466 34734 + 2.A.49.9.2
TC k141_172607 k141_172607_24 34764 36152 + 2.A.66.1.33
pfam k141_172607 k141_172607_25 36289 37395 - PepSY_TM
pfam k141_172607 k141_172607_26 37415 38791 - DUF4374
TC k141_172607 k141_172607_27 38806 41196 - 1.B.14.3.6
Gene ID: k141_172607_2
Type: TC
Location: 2209 - 3072 (-)
Gene ID: k141_172607_3
Type: CAZyme
Location: 3307 - 6459 (+)
Gene ID: k141_172607_4
Type: TF
Location: 6518 - 7408 (-)
Gene ID: k141_172607_5
Type:
Location: 7575 - 7784 (-)
Gene ID: k141_172607_6
Type: TC
Location: 8259 - 11333 (+)
Gene ID: k141_172607_7
Type: TC
Location: 11345 - 12877 (+)
Gene ID: k141_172607_8
Type: CAZyme
Location: 12902 - 14011 (+)
Gene ID: k141_172607_9
Type: pfam
Location: 14051 - 15238 (+)
Gene ID: k141_172607_10
Type: pfam
Location: 15455 - 16789 (-)
Gene ID: k141_172607_11
Type: TC
Location: 16807 - 20079 (-)
Gene ID: k141_172607_12
Type: pfam
Location: 20282 - 22924 (-)
Gene ID: k141_172607_13
Type: CAZyme
Location: 23146 - 25200 (+)
Gene ID: k141_172607_14
Type: STP
Location: 25638 - 26216 (+)
Gene ID: k141_172607_15
Type: pfam
Location: 26450 - 26842 (+)
Gene ID: k141_172607_16
Type: TC
Location: 26866 - 27789 (+)
Gene ID: k141_172607_17
Type: TC
Location: 27825 - 29162 (+)
Gene ID: k141_172607_18
Type: TC
Location: 29171 - 30160 (+)
Gene ID: k141_172607_19
Type: TC
Location: 30157 - 30813 (+)
Gene ID: k141_172607_20
Type: TC
Location: 30851 - 31414 (+)
Gene ID: k141_172607_21
Type: TC
Location: 31437 - 32039 (+)
Gene ID: k141_172607_22
Type: pfam
Location: 32115 - 33149 (+)
Gene ID: k141_172607_23
Type: TC
Location: 33466 - 34734 (+)
Gene ID: k141_172607_24
Type: TC
Location: 34764 - 36152 (+)
Gene ID: k141_172607_25
Type: pfam
Location: 36289 - 37395 (-)
Gene ID: k141_172607_26
Type: pfam
Location: 37415 - 38791 (-)
Gene ID: k141_172607_27
Type: TC
Location: 38806 - 41196 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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