dbCAN Logo

Cluster: SW196_bin.29_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_200827 k141_200827_2 2935 3903 + 1.A.34.1.3
TF k141_200827 k141_200827_3 3926 4270 + MerR
STP k141_200827 k141_200827_4 4420 6702 - HD
CAZyme k141_200827 k141_200827_5 6847 8106 - GH23
pfam k141_200827 k141_200827_6 8110 8913 - DUF5683
pfam k141_200827 k141_200827_7 8928 9830 - ParBc | HTH_ParB | ParB_dimer
TC k141_200827 k141_200827_8 9908 10672 - 8.A.3.2.3
pfam k141_200827 k141_200827_9 10992 11762 + SurE
CAZyme k141_200827 k141_200827_10 11759 12892 + GT19
Gene ID: k141_200827_2
Type: TC
Location: 2935 - 3903 (+)
Gene ID: k141_200827_3
Type: TF
Location: 3926 - 4270 (+)
Gene ID: k141_200827_4
Type: STP
Location: 4420 - 6702 (-)
Gene ID: k141_200827_5
Type: CAZyme
Location: 6847 - 8106 (-)
Gene ID: k141_200827_6
Type: pfam
Location: 8110 - 8913 (-)
Gene ID: k141_200827_7
Type: pfam
Location: 8928 - 9830 (-)
Gene ID: k141_200827_8
Type: TC
Location: 9908 - 10672 (-)
Gene ID: k141_200827_9
Type: pfam
Location: 10992 - 11762 (+)
Gene ID: k141_200827_10
Type: CAZyme
Location: 11759 - 12892 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List