Cluster: SW045_bin.65_CGC3
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: SW045_bin.65
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_125616 | k141_125616_2 | 178 | 1509 | - | 3.A.18.1.1 |
| CAZyme | k141_125616 | k141_125616_3 | 1610 | 4054 | - | GH27 | GH5_7 |
| pfam | k141_125616 | k141_125616_4 | 4104 | 5246 | - | GlcNAc_2-epim |
| TC | k141_125616 | k141_125616_5 | 5233 | 6621 | - | 2.A.2.3.6 |
| CAZyme | k141_125616 | k141_125616_6 | 6614 | 7642 | - | GH130_1 |
| TF | k141_125616 | k141_125616_7 | 7826 | 8713 | - | HTH_AraC |
| pfam | k141_125616 | k141_125616_8 | 8929 | 9528 | + | Sua5_yciO_yrdC |
| TC | k141_125616 | k141_125616_9 | 9577 | 10827 | + | 9.B.18.1.3 |
Gene ID: k141_125616_2
Type: TC
Location: 178 - 1509 (-)
Type: TC
Location: 178 - 1509 (-)
Gene ID: k141_125616_3
Type: CAZyme
Location: 1610 - 4054 (-)
Type: CAZyme
Location: 1610 - 4054 (-)
Gene ID: k141_125616_4
Type: pfam
Location: 4104 - 5246 (-)
Type: pfam
Location: 4104 - 5246 (-)
Gene ID: k141_125616_5
Type: TC
Location: 5233 - 6621 (-)
Type: TC
Location: 5233 - 6621 (-)
Gene ID: k141_125616_6
Type: CAZyme
Location: 6614 - 7642 (-)
Type: CAZyme
Location: 6614 - 7642 (-)
Gene ID: k141_125616_7
Type: TF
Location: 7826 - 8713 (-)
Type: TF
Location: 7826 - 8713 (-)
Gene ID: k141_125616_8
Type: pfam
Location: 8929 - 9528 (+)
Type: pfam
Location: 8929 - 9528 (+)
Gene ID: k141_125616_9
Type: TC
Location: 9577 - 10827 (+)
Type: TC
Location: 9577 - 10827 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp934692905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.