Cluster: SW045_bin.65_CGC13
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: SW045_bin.65
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_60692 | k141_60692_117 | 151332 | 153779 | + | 1.B.14.6.12 |
| pfam | k141_60692 | k141_60692_118 | 153785 | 155032 | + | DUF4249 |
| TC | k141_60692 | k141_60692_119 | 155055 | 157496 | + | 1.B.14.6.12 |
| pfam | k141_60692 | k141_60692_120 | 157502 | 158752 | + | DUF4249 |
| pfam | k141_60692 | k141_60692_121 | 158765 | 159217 | + | DUF4293 |
| TC | k141_60692 | k141_60692_122 | 159287 | 160276 | + | 1.A.23.2.1 |
| STP | k141_60692 | k141_60692_123 | 160433 | 161974 | + | PglZ | Response_reg |
| pfam | k141_60692 | k141_60692_124 | 161971 | 162852 | + | Exo_endo_phos |
| CAZyme | k141_60692 | k141_60692_125 | 162862 | 165549 | - | GH13_10 |
| NULL(UNKNOWN) | k141_60692 | k141_60692_126 | 165655 | 166800 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_60692 | k141_60692_127 | 166938 | 169319 | - | GH13_6 |
Gene ID: k141_60692_117
Type: TC
Location: 151332 - 153779 (+)
Type: TC
Location: 151332 - 153779 (+)
Gene ID: k141_60692_118
Type: pfam
Location: 153785 - 155032 (+)
Type: pfam
Location: 153785 - 155032 (+)
Gene ID: k141_60692_119
Type: TC
Location: 155055 - 157496 (+)
Type: TC
Location: 155055 - 157496 (+)
Gene ID: k141_60692_120
Type: pfam
Location: 157502 - 158752 (+)
Type: pfam
Location: 157502 - 158752 (+)
Gene ID: k141_60692_121
Type: pfam
Location: 158765 - 159217 (+)
Type: pfam
Location: 158765 - 159217 (+)
Gene ID: k141_60692_122
Type: TC
Location: 159287 - 160276 (+)
Type: TC
Location: 159287 - 160276 (+)
Gene ID: k141_60692_123
Type: STP
Location: 160433 - 161974 (+)
Type: STP
Location: 160433 - 161974 (+)
Gene ID: k141_60692_124
Type: pfam
Location: 161971 - 162852 (+)
Type: pfam
Location: 161971 - 162852 (+)
Gene ID: k141_60692_125
Type: CAZyme
Location: 162862 - 165549 (-)
Type: CAZyme
Location: 162862 - 165549 (-)
Gene ID: k141_60692_126
Type:
Location: 165655 - 166800 (-)
Type:
Location: 165655 - 166800 (-)
Gene ID: k141_60692_127
Type: CAZyme
Location: 166938 - 169319 (-)
Type: CAZyme
Location: 166938 - 169319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp934692905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.