Cluster: SW045_bin.65_CGC11
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: SW045_bin.65
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_60692 | k141_60692_15 | 21623 | 22366 | - | 3.A.1.4.6 |
| peptidase | k141_60692 | k141_60692_16 | 22354 | 23472 | - | M28.UNW |
| STP | k141_60692 | k141_60692_17 | 23508 | 24470 | - | Pribosyltran |
| TC | k141_60692 | k141_60692_18 | 24819 | 26444 | + | 4.C.1.1.7 |
| pfam | k141_60692 | k141_60692_19 | 26576 | 27571 | + | RecA | Rad51 | RecA_C |
| pfam | k141_60692 | k141_60692_20 | 27612 | 29123 | + | FAD_binding_3 | NAD_binding_8 | FAD-depend_C |
| CAZyme | k141_60692 | k141_60692_21 | 29295 | 31736 | - | CBM32 |
| NULL(UNKNOWN) | k141_60692 | k141_60692_22 | 31793 | 32380 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_60692 | k141_60692_23 | 32531 | 34906 | - | GH3 |
| CAZyme | k141_60692 | k141_60692_24 | 35097 | 36713 | - | GH30_1 |
| CAZyme | k141_60692 | k141_60692_25 | 36715 | 40152 | - | GH149 |
| TC | k141_60692 | k141_60692_26 | 40307 | 41665 | - | 2.A.2.3.6 |
| CAZyme | k141_60692 | k141_60692_27 | 41735 | 42721 | - | GH16_3 |
Gene ID: k141_60692_15
Type: TC
Location: 21623 - 22366 (-)
Type: TC
Location: 21623 - 22366 (-)
Gene ID: k141_60692_16
Type: peptidase
Location: 22354 - 23472 (-)
Type: peptidase
Location: 22354 - 23472 (-)
Gene ID: k141_60692_17
Type: STP
Location: 23508 - 24470 (-)
Type: STP
Location: 23508 - 24470 (-)
Gene ID: k141_60692_18
Type: TC
Location: 24819 - 26444 (+)
Type: TC
Location: 24819 - 26444 (+)
Gene ID: k141_60692_19
Type: pfam
Location: 26576 - 27571 (+)
Type: pfam
Location: 26576 - 27571 (+)
Gene ID: k141_60692_20
Type: pfam
Location: 27612 - 29123 (+)
Type: pfam
Location: 27612 - 29123 (+)
Gene ID: k141_60692_21
Type: CAZyme
Location: 29295 - 31736 (-)
Type: CAZyme
Location: 29295 - 31736 (-)
Gene ID: k141_60692_22
Type:
Location: 31793 - 32380 (-)
Type:
Location: 31793 - 32380 (-)
Gene ID: k141_60692_23
Type: CAZyme
Location: 32531 - 34906 (-)
Type: CAZyme
Location: 32531 - 34906 (-)
Gene ID: k141_60692_24
Type: CAZyme
Location: 35097 - 36713 (-)
Type: CAZyme
Location: 35097 - 36713 (-)
Gene ID: k141_60692_25
Type: CAZyme
Location: 36715 - 40152 (-)
Type: CAZyme
Location: 36715 - 40152 (-)
Gene ID: k141_60692_26
Type: TC
Location: 40307 - 41665 (-)
Type: TC
Location: 40307 - 41665 (-)
Gene ID: k141_60692_27
Type: CAZyme
Location: 41735 - 42721 (-)
Type: CAZyme
Location: 41735 - 42721 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Paludibacteraceae
Genus
RF16
Species
RF16 sp934692905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.