Cluster: SPMP94_bin.81_CGC4
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP94_bin.81
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_186506 | opera_contig_186506_151 | 178315 | 178692 | - | 1.A.22.1.8 |
| NULL(UNKNOWN) | opera_contig_186506 | opera_contig_186506_152 | 178868 | 179104 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_186506 | opera_contig_186506_153 | 179062 | 179445 | - | 1.A.78.2.2 |
| peptidase | opera_contig_186506 | opera_contig_186506_154 | 179540 | 181462 | - | C44.UPW |
| STP | opera_contig_186506 | opera_contig_186506_155 | 181702 | 182508 | - | Peptidase_M23 |
| CAZyme | opera_contig_186506 | opera_contig_186506_156 | 182710 | 183723 | - | GT2 |
| pfam | opera_contig_186506 | opera_contig_186506_157 | 183869 | 184732 | + | 2-Hacid_dh_C | NAD_binding_2 | F420_oxidored | NAD_binding_11 |
| pfam | opera_contig_186506 | opera_contig_186506_158 | 184795 | 185031 | - | Ribosomal_S18 |
| TC | opera_contig_186506 | opera_contig_186506_159 | 185053 | 185604 | - | 3.A.7.19.1 |
Gene ID: opera_contig_186506_151
Type: TC
Location: 178315 - 178692 (-)
Type: TC
Location: 178315 - 178692 (-)
Gene ID: opera_contig_186506_152
Type:
Location: 178868 - 179104 (-)
Type:
Location: 178868 - 179104 (-)
Gene ID: opera_contig_186506_153
Type: TC
Location: 179062 - 179445 (-)
Type: TC
Location: 179062 - 179445 (-)
Gene ID: opera_contig_186506_154
Type: peptidase
Location: 179540 - 181462 (-)
Type: peptidase
Location: 179540 - 181462 (-)
Gene ID: opera_contig_186506_155
Type: STP
Location: 181702 - 182508 (-)
Type: STP
Location: 181702 - 182508 (-)
Gene ID: opera_contig_186506_156
Type: CAZyme
Location: 182710 - 183723 (-)
Type: CAZyme
Location: 182710 - 183723 (-)
Gene ID: opera_contig_186506_157
Type: pfam
Location: 183869 - 184732 (+)
Type: pfam
Location: 183869 - 184732 (+)
Gene ID: opera_contig_186506_158
Type: pfam
Location: 184795 - 185031 (-)
Type: pfam
Location: 184795 - 185031 (-)
Gene ID: opera_contig_186506_159
Type: TC
Location: 185053 - 185604 (-)
Type: TC
Location: 185053 - 185604 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus salivarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.