Cluster: SPMP94_bin.81_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP94_bin.81
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_186508 | opera_contig_186508_76 | 91077 | 92012 | - | GT2 |
| pfam | opera_contig_186508 | opera_contig_186508_77 | 92234 | 93097 | + | DegV |
| TC | opera_contig_186508 | opera_contig_186508_78 | 93228 | 95042 | + | 3.A.3.25.3 |
| TC | opera_contig_186508 | opera_contig_186508_79 | 95296 | 96735 | + | 2.A.3.7.6 |
Gene ID: opera_contig_186508_76
Type: CAZyme
Location: 91077 - 92012 (-)
Type: CAZyme
Location: 91077 - 92012 (-)
Gene ID: opera_contig_186508_77
Type: pfam
Location: 92234 - 93097 (+)
Type: pfam
Location: 92234 - 93097 (+)
Gene ID: opera_contig_186508_78
Type: TC
Location: 93228 - 95042 (+)
Type: TC
Location: 93228 - 95042 (+)
Gene ID: opera_contig_186508_79
Type: TC
Location: 95296 - 96735 (+)
Type: TC
Location: 95296 - 96735 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus salivarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.