Cluster: SPMP94_bin.81_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP94_bin.81
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_186506 | opera_contig_186506_962 | 1016655 | 1018589 | - | 2.A.2.2.2 |
| CAZyme | opera_contig_186506 | opera_contig_186506_963 | 1018792 | 1021815 | - | GH2 |
| sulfatase | opera_contig_186506 | opera_contig_186506_964 | 1021987 | 1023564 | - | S1_97 |
| CAZyme | opera_contig_186506 | opera_contig_186506_965 | 1023653 | 1025095 | - | CBM50 |
| pfam | opera_contig_186506 | opera_contig_186506_966 | 1025229 | 1026245 | - | NAD_Gly3P_dh_N | ApbA | NAD_binding_2 | F420_oxidored | NAD_Gly3P_dh_C | GPD_NAD_C_bact |
| TC | opera_contig_186506 | opera_contig_186506_967 | 1026330 | 1027460 | - | 2.A.86.1.8 |
Gene ID: opera_contig_186506_962
Type: TC
Location: 1016655 - 1018589 (-)
Type: TC
Location: 1016655 - 1018589 (-)
Gene ID: opera_contig_186506_963
Type: CAZyme
Location: 1018792 - 1021815 (-)
Type: CAZyme
Location: 1018792 - 1021815 (-)
Gene ID: opera_contig_186506_964
Type: sulfatase
Location: 1021987 - 1023564 (-)
Type: sulfatase
Location: 1021987 - 1023564 (-)
Gene ID: opera_contig_186506_965
Type: CAZyme
Location: 1023653 - 1025095 (-)
Type: CAZyme
Location: 1023653 - 1025095 (-)
Gene ID: opera_contig_186506_966
Type: pfam
Location: 1025229 - 1026245 (-)
Type: pfam
Location: 1025229 - 1026245 (-)
Gene ID: opera_contig_186506_967
Type: TC
Location: 1026330 - 1027460 (-)
Type: TC
Location: 1026330 - 1027460 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Ligilactobacillus
Species
Ligilactobacillus salivarius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.