dbCAN HGM

Cluster: SPMP65_bin.7_CGC9

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	opera_contig_110540	opera_contig_110540_50	52885	53574	+	2.A.1.1.55
TC	opera_contig_110540	opera_contig_110540_51	53584	54015	+	2.A.1.1.55
TC	opera_contig_110540	opera_contig_110540_52	54033	54251	+	2.A.1.1.3
NULL(UNKNOWN)	opera_contig_110540	opera_contig_110540_53	55186	55413	+	NULL(UNKNOWN) [View Structural Homologs]
TF	opera_contig_110540	opera_contig_110540_54	55473	56051	+	HTH_AraC \| HTH_AraC
TC	opera_contig_110540	opera_contig_110540_55	56168	56641	+	2.A.1.5.4
NULL(UNKNOWN)	opera_contig_110540	opera_contig_110540_56	56910	57128	-	NULL(UNKNOWN) [View Structural Homologs]
NULL(UNKNOWN)	opera_contig_110540	opera_contig_110540_57	57125	57286	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	opera_contig_110540	opera_contig_110540_58	57510	58274	+	GH35

Gene ID: opera_contig_110540_50
Type: TC
Location: 52885 - 53574 (+)

Gene ID: opera_contig_110540_51
Type: TC
Location: 53584 - 54015 (+)

Gene ID: opera_contig_110540_52
Type: TC
Location: 54033 - 54251 (+)

Gene ID: opera_contig_110540_53
Type:
Location: 55186 - 55413 (+)

Gene ID: opera_contig_110540_54
Type: TF
Location: 55473 - 56051 (+)

Gene ID: opera_contig_110540_55
Type: TC
Location: 56168 - 56641 (+)

Gene ID: opera_contig_110540_56
Type:
Location: 56910 - 57128 (-)

Gene ID: opera_contig_110540_57
Type:
Location: 57125 - 57286 (-)

Gene ID: opera_contig_110540_58
Type: CAZyme
Location: 57510 - 58274 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.