Cluster: SPMP65_bin.7_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110539 | opera_contig_110539_51 | 60939 | 62882 | + | 2.A.2.2.1 |
| pfam | opera_contig_110539 | opera_contig_110539_52 | 63091 | 64050 | - | Bgal_small_N |
| CAZyme | opera_contig_110539 | opera_contig_110539_53 | 64034 | 65914 | - | GH2 |
Gene ID: opera_contig_110539_51
Type: TC
Location: 60939 - 62882 (+)
Type: TC
Location: 60939 - 62882 (+)
Gene ID: opera_contig_110539_52
Type: pfam
Location: 63091 - 64050 (-)
Type: pfam
Location: 63091 - 64050 (-)
Gene ID: opera_contig_110539_53
Type: CAZyme
Location: 64034 - 65914 (-)
Type: CAZyme
Location: 64034 - 65914 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.