dbCAN HGM

Cluster: SPMP65_bin.7_CGC7

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	opera_contig_110539	opera_contig_110539_38	43519	44592	+	2.A.1.14.7
TF	opera_contig_110539	opera_contig_110539_39	44664	45413	-	GntR
TC	opera_contig_110539	opera_contig_110539_40	45546	46883	+	4.A.3.2.8
CAZyme	opera_contig_110539	opera_contig_110539_41	46912	49545	+	GH38
CAZyme	opera_contig_110539	opera_contig_110539_42	49563	50855	+	GH125
pfam	opera_contig_110539	opera_contig_110539_43	51056	51508	+	PTS_EIIA_2
pfam	opera_contig_110539	opera_contig_110539_44	51505	51801	+	PTS_IIB
TC	opera_contig_110539	opera_contig_110539_45	51826	53184	+	4.A.7.1.4

Gene ID: opera_contig_110539_38
Type: TC
Location: 43519 - 44592 (+)

Gene ID: opera_contig_110539_39
Type: TF
Location: 44664 - 45413 (-)

Gene ID: opera_contig_110539_40
Type: TC
Location: 45546 - 46883 (+)

Gene ID: opera_contig_110539_41
Type: CAZyme
Location: 46912 - 49545 (+)

Gene ID: opera_contig_110539_42
Type: CAZyme
Location: 49563 - 50855 (+)

Gene ID: opera_contig_110539_43
Type: pfam
Location: 51056 - 51508 (+)

Gene ID: opera_contig_110539_44
Type: pfam
Location: 51505 - 51801 (+)

Gene ID: opera_contig_110539_45
Type: TC
Location: 51826 - 53184 (+)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.