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Cluster: SPMP65_bin.7_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_110553 opera_contig_110553_2 534 1988 - GH1
TC opera_contig_110553 opera_contig_110553_3 2001 2324 - 4.A.3.2.2
TC opera_contig_110553 opera_contig_110553_4 2398 2709 - 4.A.3.2.4
TF opera_contig_110553 opera_contig_110553_5 2866 3561 + GntR
TC opera_contig_110553 opera_contig_110553_6 3880 4875 + 3.A.1.34.1
TC opera_contig_110553 opera_contig_110553_7 4872 5792 + 3.A.1.34.1
TC opera_contig_110553 opera_contig_110553_8 5785 6543 + 3.A.1.34.1
pfam opera_contig_110553 opera_contig_110553_9 6714 7589 + DUF915
TC opera_contig_110553 opera_contig_110553_10 7697 9133 - 2.A.1.3.30
Gene ID: opera_contig_110553_2
Type: CAZyme
Location: 534 - 1988 (-)
Gene ID: opera_contig_110553_3
Type: TC
Location: 2001 - 2324 (-)
Gene ID: opera_contig_110553_4
Type: TC
Location: 2398 - 2709 (-)
Gene ID: opera_contig_110553_5
Type: TF
Location: 2866 - 3561 (+)
Gene ID: opera_contig_110553_6
Type: TC
Location: 3880 - 4875 (+)
Gene ID: opera_contig_110553_7
Type: TC
Location: 4872 - 5792 (+)
Gene ID: opera_contig_110553_8
Type: TC
Location: 5785 - 6543 (+)
Gene ID: opera_contig_110553_9
Type: pfam
Location: 6714 - 7589 (+)
Gene ID: opera_contig_110553_10
Type: TC
Location: 7697 - 9133 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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