Cluster: SPMP65_bin.7_CGC31
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110551 | opera_contig_110551_27 | 30874 | 32019 | - | CE9 |
| STP | opera_contig_110551 | opera_contig_110551_28 | 32030 | 33205 | - | SIS | SIS |
| TF | opera_contig_110551 | opera_contig_110551_29 | 33229 | 33963 | - | GntR |
| TC | opera_contig_110551 | opera_contig_110551_30 | 34051 | 34881 | - | 4.A.6.1.18 |
| TC | opera_contig_110551 | opera_contig_110551_31 | 34865 | 35782 | - | 4.A.6.1.18 |
| TC | opera_contig_110551 | opera_contig_110551_32 | 35803 | 36297 | - | 4.A.6.1.18 |
| NULL(UNKNOWN) | opera_contig_110551 | opera_contig_110551_33 | 36318 | 38345 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_110551 | opera_contig_110551_34 | 38351 | 38746 | - | 4.A.6.1.21 |
| NULL(UNKNOWN) | opera_contig_110551 | opera_contig_110551_35 | 39261 | 39551 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_110551 | opera_contig_110551_36 | 39656 | 41164 | - | CE20 |
| pfam | opera_contig_110551 | opera_contig_110551_37 | 41241 | 42119 | - | Aldose_epim |
| TC | opera_contig_110551 | opera_contig_110551_38 | 42372 | 42875 | + | 2.A.88.9.1 |
Gene ID: opera_contig_110551_27
Type: CAZyme
Location: 30874 - 32019 (-)
Type: CAZyme
Location: 30874 - 32019 (-)
Gene ID: opera_contig_110551_28
Type: STP
Location: 32030 - 33205 (-)
Type: STP
Location: 32030 - 33205 (-)
Gene ID: opera_contig_110551_29
Type: TF
Location: 33229 - 33963 (-)
Type: TF
Location: 33229 - 33963 (-)
Gene ID: opera_contig_110551_30
Type: TC
Location: 34051 - 34881 (-)
Type: TC
Location: 34051 - 34881 (-)
Gene ID: opera_contig_110551_31
Type: TC
Location: 34865 - 35782 (-)
Type: TC
Location: 34865 - 35782 (-)
Gene ID: opera_contig_110551_32
Type: TC
Location: 35803 - 36297 (-)
Type: TC
Location: 35803 - 36297 (-)
Gene ID: opera_contig_110551_33
Type:
Location: 36318 - 38345 (-)
Type:
Location: 36318 - 38345 (-)
Gene ID: opera_contig_110551_34
Type: TC
Location: 38351 - 38746 (-)
Type: TC
Location: 38351 - 38746 (-)
Gene ID: opera_contig_110551_35
Type:
Location: 39261 - 39551 (+)
Type:
Location: 39261 - 39551 (+)
Gene ID: opera_contig_110551_36
Type: CAZyme
Location: 39656 - 41164 (-)
Type: CAZyme
Location: 39656 - 41164 (-)
Gene ID: opera_contig_110551_37
Type: pfam
Location: 41241 - 42119 (-)
Type: pfam
Location: 41241 - 42119 (-)
Gene ID: opera_contig_110551_38
Type: TC
Location: 42372 - 42875 (+)
Type: TC
Location: 42372 - 42875 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.