Cluster: SPMP65_bin.7_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110535 | opera_contig_110535_112 | 116855 | 117313 | + | 4.A.2.1.8 |
| TC | opera_contig_110535 | opera_contig_110535_113 | 117310 | 117615 | + | 4.A.2.1.10 |
| TC | opera_contig_110535 | opera_contig_110535_114 | 117629 | 118738 | + | 4.A.2.1.6 |
| CAZyme | opera_contig_110535 | opera_contig_110535_115 | 118760 | 121429 | + | GH38 |
Gene ID: opera_contig_110535_112
Type: TC
Location: 116855 - 117313 (+)
Type: TC
Location: 116855 - 117313 (+)
Gene ID: opera_contig_110535_113
Type: TC
Location: 117310 - 117615 (+)
Type: TC
Location: 117310 - 117615 (+)
Gene ID: opera_contig_110535_114
Type: TC
Location: 117629 - 118738 (+)
Type: TC
Location: 117629 - 118738 (+)
Gene ID: opera_contig_110535_115
Type: CAZyme
Location: 118760 - 121429 (+)
Type: CAZyme
Location: 118760 - 121429 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.