Cluster: SPMP65_bin.7_CGC29
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110550 | opera_contig_110550_38 | 38269 | 39360 | - | GT28 |
| pfam | opera_contig_110550 | opera_contig_110550_39 | 39357 | 40751 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | opera_contig_110550 | opera_contig_110550_40 | 40764 | 41720 | - | 9.B.146.1.6 |
Gene ID: opera_contig_110550_38
Type: CAZyme
Location: 38269 - 39360 (-)
Type: CAZyme
Location: 38269 - 39360 (-)
Gene ID: opera_contig_110550_39
Type: pfam
Location: 39357 - 40751 (-)
Type: pfam
Location: 39357 - 40751 (-)
Gene ID: opera_contig_110550_40
Type: TC
Location: 40764 - 41720 (-)
Type: TC
Location: 40764 - 41720 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.