Cluster: SPMP65_bin.7_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110549 | opera_contig_110549_50 | 56990 | 57859 | + | 2.A.7.5.4 |
| pfam | opera_contig_110549 | opera_contig_110549_51 | 58129 | 59481 | + | PGI |
| CAZyme | opera_contig_110549 | opera_contig_110549_52 | 59874 | 60980 | - | GT113 |
| CAZyme | opera_contig_110549 | opera_contig_110549_53 | 61136 | 62245 | + | GT113 |
| TC | opera_contig_110549 | opera_contig_110549_54 | 62519 | 63034 | - | 3.A.1.26.7 |
Gene ID: opera_contig_110549_50
Type: TC
Location: 56990 - 57859 (+)
Type: TC
Location: 56990 - 57859 (+)
Gene ID: opera_contig_110549_51
Type: pfam
Location: 58129 - 59481 (+)
Type: pfam
Location: 58129 - 59481 (+)
Gene ID: opera_contig_110549_52
Type: CAZyme
Location: 59874 - 60980 (-)
Type: CAZyme
Location: 59874 - 60980 (-)
Gene ID: opera_contig_110549_53
Type: CAZyme
Location: 61136 - 62245 (+)
Type: CAZyme
Location: 61136 - 62245 (+)
Gene ID: opera_contig_110549_54
Type: TC
Location: 62519 - 63034 (-)
Type: TC
Location: 62519 - 63034 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.