Cluster: SPMP65_bin.7_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110548 | opera_contig_110548_38 | 36019 | 37098 | + | GT2 |
| CAZyme | opera_contig_110548 | opera_contig_110548_39 | 37098 | 39062 | + | GT2 | GT2 |
| NULL(UNKNOWN) | opera_contig_110548 | opera_contig_110548_40 | 39094 | 40950 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_110548 | opera_contig_110548_41 | 41430 | 42773 | + | 2.A.55.2.6 |
Gene ID: opera_contig_110548_38
Type: CAZyme
Location: 36019 - 37098 (+)
Type: CAZyme
Location: 36019 - 37098 (+)
Gene ID: opera_contig_110548_39
Type: CAZyme
Location: 37098 - 39062 (+)
Type: CAZyme
Location: 37098 - 39062 (+)
Gene ID: opera_contig_110548_40
Type:
Location: 39094 - 40950 (+)
Type:
Location: 39094 - 40950 (+)
Gene ID: opera_contig_110548_41
Type: TC
Location: 41430 - 42773 (+)
Type: TC
Location: 41430 - 42773 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.