Cluster: SPMP65_bin.7_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110546 | opera_contig_110546_40 | 45425 | 47920 | - | GH31_2 |
| TC | opera_contig_110546 | opera_contig_110546_41 | 48206 | 49633 | + | 2.A.2.3.1 |
| TC | opera_contig_110546 | opera_contig_110546_42 | 50076 | 51272 | - | 2.A.1.2.70 |
| pfam | opera_contig_110546 | opera_contig_110546_43 | 51444 | 51917 | - | LuxS |
| TC | opera_contig_110546 | opera_contig_110546_44 | 51989 | 53557 | - | 2.A.15.2.2 |
Gene ID: opera_contig_110546_40
Type: CAZyme
Location: 45425 - 47920 (-)
Type: CAZyme
Location: 45425 - 47920 (-)
Gene ID: opera_contig_110546_41
Type: TC
Location: 48206 - 49633 (+)
Type: TC
Location: 48206 - 49633 (+)
Gene ID: opera_contig_110546_42
Type: TC
Location: 50076 - 51272 (-)
Type: TC
Location: 50076 - 51272 (-)
Gene ID: opera_contig_110546_43
Type: pfam
Location: 51444 - 51917 (-)
Type: pfam
Location: 51444 - 51917 (-)
Gene ID: opera_contig_110546_44
Type: TC
Location: 51989 - 53557 (-)
Type: TC
Location: 51989 - 53557 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.