Cluster: SPMP65_bin.7_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110534 | opera_contig_110534_141 | 124573 | 127242 | - | 3.A.3.2.28 |
| pfam | opera_contig_110534 | opera_contig_110534_142 | 127466 | 128284 | - | NAD_synthase |
| pfam | opera_contig_110534 | opera_contig_110534_143 | 128305 | 129768 | - | NAPRTase | NAPRTase_N | NAPRTase_C |
| CAZyme | opera_contig_110534 | opera_contig_110534_144 | 129894 | 130616 | + | GT26 |
| TF | opera_contig_110534 | opera_contig_110534_145 | 130718 | 131419 | - | GntR |
| CAZyme | opera_contig_110534 | opera_contig_110534_146 | 131447 | 132589 | - | CE9 |
Gene ID: opera_contig_110534_141
Type: TC
Location: 124573 - 127242 (-)
Type: TC
Location: 124573 - 127242 (-)
Gene ID: opera_contig_110534_142
Type: pfam
Location: 127466 - 128284 (-)
Type: pfam
Location: 127466 - 128284 (-)
Gene ID: opera_contig_110534_143
Type: pfam
Location: 128305 - 129768 (-)
Type: pfam
Location: 128305 - 129768 (-)
Gene ID: opera_contig_110534_144
Type: CAZyme
Location: 129894 - 130616 (+)
Type: CAZyme
Location: 129894 - 130616 (+)
Gene ID: opera_contig_110534_145
Type: TF
Location: 130718 - 131419 (-)
Type: TF
Location: 130718 - 131419 (-)
Gene ID: opera_contig_110534_146
Type: CAZyme
Location: 131447 - 132589 (-)
Type: CAZyme
Location: 131447 - 132589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.