Cluster: SPMP65_bin.7_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110543 | opera_contig_110543_12 | 13392 | 14888 | - | GT4 |
| CAZyme | opera_contig_110543 | opera_contig_110543_13 | 14888 | 16486 | - | GT4 |
| pfam | opera_contig_110543 | opera_contig_110543_14 | 16838 | 17812 | - | EamA | EamA |
| TC | opera_contig_110543 | opera_contig_110543_15 | 17901 | 19274 | - | 2.A.1.3.49 |
Gene ID: opera_contig_110543_12
Type: CAZyme
Location: 13392 - 14888 (-)
Type: CAZyme
Location: 13392 - 14888 (-)
Gene ID: opera_contig_110543_13
Type: CAZyme
Location: 14888 - 16486 (-)
Type: CAZyme
Location: 14888 - 16486 (-)
Gene ID: opera_contig_110543_14
Type: pfam
Location: 16838 - 17812 (-)
Type: pfam
Location: 16838 - 17812 (-)
Gene ID: opera_contig_110543_15
Type: TC
Location: 17901 - 19274 (-)
Type: TC
Location: 17901 - 19274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.