Cluster: SPMP65_bin.7_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110541 | opera_contig_110541_71 | 71335 | 72768 | + | AA1 |
| peptidase | opera_contig_110541 | opera_contig_110541_72 | 72985 | 73722 | + | M20.UNW |
| STP | opera_contig_110541 | opera_contig_110541_73 | 73865 | 74779 | + | PfkB |
| TC | opera_contig_110541 | opera_contig_110541_74 | 75092 | 76054 | + | 3.A.14.1.1 |
| TC | opera_contig_110541 | opera_contig_110541_75 | 76008 | 77039 | + | 3.A.14.1.2 |
| TC | opera_contig_110541 | opera_contig_110541_76 | 77039 | 77347 | + | 3.A.14.1.2 |
Gene ID: opera_contig_110541_71
Type: CAZyme
Location: 71335 - 72768 (+)
Type: CAZyme
Location: 71335 - 72768 (+)
Gene ID: opera_contig_110541_72
Type: peptidase
Location: 72985 - 73722 (+)
Type: peptidase
Location: 72985 - 73722 (+)
Gene ID: opera_contig_110541_73
Type: STP
Location: 73865 - 74779 (+)
Type: STP
Location: 73865 - 74779 (+)
Gene ID: opera_contig_110541_74
Type: TC
Location: 75092 - 76054 (+)
Type: TC
Location: 75092 - 76054 (+)
Gene ID: opera_contig_110541_75
Type: TC
Location: 76008 - 77039 (+)
Type: TC
Location: 76008 - 77039 (+)
Gene ID: opera_contig_110541_76
Type: TC
Location: 77039 - 77347 (+)
Type: TC
Location: 77039 - 77347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.