Cluster: SPMP65_bin.7_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP65_bin.7
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_1298 | opera_contig_1298_2 | 1995 | 3056 | - | 3.A.1.104.1 |
| TC | opera_contig_1298 | opera_contig_1298_3 | 3071 | 3886 | - | 3.A.1.104.1 |
| CAZyme | opera_contig_1298 | opera_contig_1298_4 | 4075 | 8646 | + | GT2 |
Gene ID: opera_contig_1298_2
Type: TC
Location: 1995 - 3056 (-)
Type: TC
Location: 1995 - 3056 (-)
Gene ID: opera_contig_1298_3
Type: TC
Location: 3071 - 3886 (-)
Type: TC
Location: 3071 - 3886 (-)
Gene ID: opera_contig_1298_4
Type: CAZyme
Location: 4075 - 8646 (+)
Type: CAZyme
Location: 4075 - 8646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Pediococcus
Species
Pediococcus acidilactici_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.