Cluster: SPMP40_bin.50_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP40_bin.50
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_4 | opera_contig_4_64 | 69332 | 70183 | + | 1.A.23.2.1 |
| STP | opera_contig_4 | opera_contig_4_65 | 70280 | 71233 | - | Glucokinase |
| CAZyme | opera_contig_4 | opera_contig_4_66 | 71265 | 72689 | - | GH125 |
| CAZyme | opera_contig_4 | opera_contig_4_67 | 72702 | 74318 | - | GH63 |
| CAZyme | opera_contig_4 | opera_contig_4_68 | 74354 | 77338 | - | GH92 |
| pfam | opera_contig_4 | opera_contig_4_69 | 77371 | 79023 | - | SusD_RagB | SusD-like_3 |
| TC | opera_contig_4 | opera_contig_4_70 | 79034 | 82207 | - | 1.B.14.6.1 |
| pfam | opera_contig_4 | opera_contig_4_71 | 82330 | 83778 | - | Metallophos | PA14 |
| NULL(UNKNOWN) | opera_contig_4 | opera_contig_4_72 | 83827 | 83922 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_4 | opera_contig_4_73 | 84218 | 86287 | - | GH20 |
| pfam | opera_contig_4 | opera_contig_4_74 | 86474 | 89104 | + | DUF4953 | DUF5117 | DUF5118 |
| TC | opera_contig_4 | opera_contig_4_75 | 89133 | 92396 | + | 1.B.14.6.1 |
Gene ID: opera_contig_4_64
Type: TC
Location: 69332 - 70183 (+)
Type: TC
Location: 69332 - 70183 (+)
Gene ID: opera_contig_4_65
Type: STP
Location: 70280 - 71233 (-)
Type: STP
Location: 70280 - 71233 (-)
Gene ID: opera_contig_4_66
Type: CAZyme
Location: 71265 - 72689 (-)
Type: CAZyme
Location: 71265 - 72689 (-)
Gene ID: opera_contig_4_67
Type: CAZyme
Location: 72702 - 74318 (-)
Type: CAZyme
Location: 72702 - 74318 (-)
Gene ID: opera_contig_4_68
Type: CAZyme
Location: 74354 - 77338 (-)
Type: CAZyme
Location: 74354 - 77338 (-)
Gene ID: opera_contig_4_69
Type: pfam
Location: 77371 - 79023 (-)
Type: pfam
Location: 77371 - 79023 (-)
Gene ID: opera_contig_4_70
Type: TC
Location: 79034 - 82207 (-)
Type: TC
Location: 79034 - 82207 (-)
Gene ID: opera_contig_4_71
Type: pfam
Location: 82330 - 83778 (-)
Type: pfam
Location: 82330 - 83778 (-)
Gene ID: opera_contig_4_72
Type:
Location: 83827 - 83922 (-)
Type:
Location: 83827 - 83922 (-)
Gene ID: opera_contig_4_73
Type: CAZyme
Location: 84218 - 86287 (-)
Type: CAZyme
Location: 84218 - 86287 (-)
Gene ID: opera_contig_4_74
Type: pfam
Location: 86474 - 89104 (+)
Type: pfam
Location: 86474 - 89104 (+)
Gene ID: opera_contig_4_75
Type: TC
Location: 89133 - 92396 (+)
Type: TC
Location: 89133 - 92396 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.