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Cluster: SPMP40_bin.50_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_4 opera_contig_4_26 25017 27794 - GH2
pfam opera_contig_4 opera_contig_4_27 27989 28741 + NigD_N | NigD_C
TC opera_contig_4 opera_contig_4_28 28904 30949 - 3.A.7.7.1
pfam opera_contig_4 opera_contig_4_29 31070 31780 - AA_kinase
TC opera_contig_4 opera_contig_4_30 32045 32536 + 8.A.58.2.7
pfam opera_contig_4 opera_contig_4_31 32533 32796 + CD225
pfam opera_contig_4 opera_contig_4_32 32777 33169 + DUF2752
TC opera_contig_4 opera_contig_4_33 33171 34463 - 2.A.66.1.4
Gene ID: opera_contig_4_26
Type: CAZyme
Location: 25017 - 27794 (-)
Gene ID: opera_contig_4_27
Type: pfam
Location: 27989 - 28741 (+)
Gene ID: opera_contig_4_28
Type: TC
Location: 28904 - 30949 (-)
Gene ID: opera_contig_4_29
Type: pfam
Location: 31070 - 31780 (-)
Gene ID: opera_contig_4_30
Type: TC
Location: 32045 - 32536 (+)
Gene ID: opera_contig_4_31
Type: pfam
Location: 32533 - 32796 (+)
Gene ID: opera_contig_4_32
Type: pfam
Location: 32777 - 33169 (+)
Gene ID: opera_contig_4_33
Type: TC
Location: 33171 - 34463 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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