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Cluster: SPMP40_bin.50_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_94 opera_contig_94_40 39366 40118 - 9.B.158.1.1
pfam opera_contig_94 opera_contig_94_41 40486 41526 + AsnA
pfam opera_contig_94 opera_contig_94_42 41580 42242 + UDG
CAZyme opera_contig_94 opera_contig_94_43 42302 44521 + GH20
TC opera_contig_94 opera_contig_94_44 44810 47593 - 1.B.42.1.8
STP opera_contig_94 opera_contig_94_45 47679 48215 - HD
CAZyme opera_contig_94 opera_contig_94_46 48358 49533 + GH171
TC opera_contig_94 opera_contig_94_47 49690 51015 - 3.A.5.1.1
pfam opera_contig_94 opera_contig_94_48 51381 52454 + HlyD_3 | Biotin_lipoyl_2 | HlyD_D23
TC opera_contig_94 opera_contig_94_49 52451 55573 + 2.A.6.2.37
pfam opera_contig_94 opera_contig_94_50 55578 56951 + OEP | OEP
TC opera_contig_94 opera_contig_94_51 57013 58335 - 2.A.66.1.28
NULL(UNKNOWN) opera_contig_94 opera_contig_94_52 58731 60110 + NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_94 opera_contig_94_53 60278 61966 - 3.A.1.120.6
pfam opera_contig_94 opera_contig_94_54 61998 63152 - MFS_1
pfam opera_contig_94 opera_contig_94_55 63227 64048 - Pantoate_transf
TC opera_contig_94 opera_contig_94_56 64116 65369 - 2.A.55.2.6
pfam opera_contig_94 opera_contig_94_57 65438 66700 - Radical_SAM
TC opera_contig_94 opera_contig_94_58 66813 67712 + 2.A.7.3.57
Gene ID: opera_contig_94_40
Type: TC
Location: 39366 - 40118 (-)
Gene ID: opera_contig_94_41
Type: pfam
Location: 40486 - 41526 (+)
Gene ID: opera_contig_94_42
Type: pfam
Location: 41580 - 42242 (+)
Gene ID: opera_contig_94_43
Type: CAZyme
Location: 42302 - 44521 (+)
Gene ID: opera_contig_94_44
Type: TC
Location: 44810 - 47593 (-)
Gene ID: opera_contig_94_45
Type: STP
Location: 47679 - 48215 (-)
Gene ID: opera_contig_94_46
Type: CAZyme
Location: 48358 - 49533 (+)
Gene ID: opera_contig_94_47
Type: TC
Location: 49690 - 51015 (-)
Gene ID: opera_contig_94_48
Type: pfam
Location: 51381 - 52454 (+)
Gene ID: opera_contig_94_49
Type: TC
Location: 52451 - 55573 (+)
Gene ID: opera_contig_94_50
Type: pfam
Location: 55578 - 56951 (+)
Gene ID: opera_contig_94_51
Type: TC
Location: 57013 - 58335 (-)
Gene ID: opera_contig_94_52
Type:
Location: 58731 - 60110 (+)
Gene ID: opera_contig_94_53
Type: TC
Location: 60278 - 61966 (-)
Gene ID: opera_contig_94_54
Type: pfam
Location: 61998 - 63152 (-)
Gene ID: opera_contig_94_55
Type: pfam
Location: 63227 - 64048 (-)
Gene ID: opera_contig_94_56
Type: TC
Location: 64116 - 65369 (-)
Gene ID: opera_contig_94_57
Type: pfam
Location: 65438 - 66700 (-)
Gene ID: opera_contig_94_58
Type: TC
Location: 66813 - 67712 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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