dbCAN Logo

Cluster: SPMP40_bin.50_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_51 opera_contig_51_41 50160 52166 - GH20
pfam opera_contig_51 opera_contig_51_42 52248 54566 - TonB_dep_Rec_b-barrel | CarboxypepD_reg | CarbopepD_reg_2 | OMP_b-brl_3
peptidase opera_contig_51 opera_contig_51_43 54942 56174 - U32.001
TC opera_contig_51 opera_contig_51_44 56523 59630 + 1.B.14.6.1
TC opera_contig_51 opera_contig_51_45 59647 61275 + 8.A.46.3.3
NULL(UNKNOWN) opera_contig_51 opera_contig_51_46 61480 61608 - NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_51 opera_contig_51_47 61615 62601 + Dus
TC opera_contig_51 opera_contig_51_48 62765 63001 + 3.D.1.6.4
Gene ID: opera_contig_51_41
Type: CAZyme
Location: 50160 - 52166 (-)
Gene ID: opera_contig_51_42
Type: pfam
Location: 52248 - 54566 (-)
Gene ID: opera_contig_51_43
Type: peptidase
Location: 54942 - 56174 (-)
Gene ID: opera_contig_51_44
Type: TC
Location: 56523 - 59630 (+)
Gene ID: opera_contig_51_45
Type: TC
Location: 59647 - 61275 (+)
Gene ID: opera_contig_51_46
Type:
Location: 61480 - 61608 (-)
Gene ID: opera_contig_51_47
Type: pfam
Location: 61615 - 62601 (+)
Gene ID: opera_contig_51_48
Type: TC
Location: 62765 - 63001 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Bacteroidaceae
→
Genus
Phocaeicola
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List