Cluster: SPMP40_bin.50_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP40_bin.50
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_10 | opera_contig_10_112 | 145293 | 147860 | - | GT35 |
| CAZyme | opera_contig_10 | opera_contig_10_113 | 147871 | 149556 | - | GT3 |
| TC | opera_contig_10 | opera_contig_10_114 | 149899 | 150360 | - | 3.A.2.2.2 |
| TC | opera_contig_10 | opera_contig_10_115 | 150426 | 152231 | - | 3.A.2.2.2 |
| pfam | opera_contig_10 | opera_contig_10_116 | 152228 | 152833 | - | ATP-synt_D |
| TC | opera_contig_10 | opera_contig_10_117 | 152854 | 154173 | - | 3.A.2.3.3 |
| TC | opera_contig_10 | opera_contig_10_118 | 154205 | 155962 | - | 3.A.2.3.3 |
Gene ID: opera_contig_10_112
Type: CAZyme
Location: 145293 - 147860 (-)
Type: CAZyme
Location: 145293 - 147860 (-)
Gene ID: opera_contig_10_113
Type: CAZyme
Location: 147871 - 149556 (-)
Type: CAZyme
Location: 147871 - 149556 (-)
Gene ID: opera_contig_10_114
Type: TC
Location: 149899 - 150360 (-)
Type: TC
Location: 149899 - 150360 (-)
Gene ID: opera_contig_10_115
Type: TC
Location: 150426 - 152231 (-)
Type: TC
Location: 150426 - 152231 (-)
Gene ID: opera_contig_10_116
Type: pfam
Location: 152228 - 152833 (-)
Type: pfam
Location: 152228 - 152833 (-)
Gene ID: opera_contig_10_117
Type: TC
Location: 152854 - 154173 (-)
Type: TC
Location: 152854 - 154173 (-)
Gene ID: opera_contig_10_118
Type: TC
Location: 154205 - 155962 (-)
Type: TC
Location: 154205 - 155962 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.